PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG052680.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 228aa    MW: 24184.2 Da    PI: 6.9278
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG052680.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA53.72.8e-17126160135
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                       C++C +  Tp+WR+gp g++tLCnaCG++y+  +l
  TRIDC4BG052680.2 126 CTHCASEVTPQWRQGPLGPRTLCNACGVRYKTGRL 160
                       *******************************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MVGGGDVDKH AAAALAQDLP SFNSFFDQTG LEVAAAAGDG ELAAGAAAGE EDLEELEWLS  60
NKDAFPSVET MAVEAVEEVP EPAPAAPSGR PAVGPRTKGR RRRVTAPWNL AEPPTLPPPL  120
PAARRCTHCA SEVTPQWRQG PLGPRTLCNA CGVRYKTGRL LPEYRPANSP TFSPLLHSNS  180
HRRVMQIRLR SESEGEGEGE GASPAVRAIA KARRAERAAA RLAAKKDD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60530.16e-34GATA family protein