PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG052950.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 261aa MW: 28187.5 Da PI: 7.9064

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG052950.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.5	2.6e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W+teEd +l + v+++G g+W+ I+r g R++k+c++rw++yl TRIDC4BG052950.2 14 RGPWSTEEDAKLMNHVAKHGLGRWSDIPRLAGIERCGKSCRLRWLNYL 61 89****************************66**********97 PP
2	Myb_DNA-binding	37.7	4.8e-12	71	109	5	45
-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++eE++l+++++ G+ W++Ia++++ gRt++ +k++w+ TRIDC4BG052950.2 71 SQEEEDLIIQLHSIIGNS-WTLIAACLP-GRTDNGVKNFWN 109 89************99.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 261 aa Download sequence
MSKAPRGPRK AVRRGPWSTE EDAKLMNHVA KHGLGRWSDI PRLAGIERCG KSCRLRWLNY 60 LRPDLKRAAL SQEEEDLIIQ LHSIIGNSWT LIAACLPGRT DNGVKNFWNA SIKHKLRRRG 120 IDPDTHEPMV DEGRRNGDAQ HILPSHLAAG SNTCSHGAVP LPDSITRYMG TDPLQLQHGV 180 VLVQPVVSSS STVGSDPSSS GSDTGEQCNN GADSGSQLFD LTASSTTTTE SGGQHEPHLL 240 PSPAGWSCSA STLTGSVSYW L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G57560.1	6e-58	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG052950.2