PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG053390.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

LBD

Protein Properties

Length: 207aa MW: 21391.9 Da PI: 7.1219

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG053390.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	126.2	1.5e-39	15	115	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlka 92 +C aCk+lrrkCa++Cv+apyf++eq +++fa++hk+FGasnv+kll++lp ++r +a+ ++ yeA+ar+rdPvyG+v++i++lqqq+++l+a TRIDC4BG053390.4 15 PCGACKFLRRKCARGCVFAPYFCHEQgAAHFAAIHKVFGASNVSKLLAHLPISDRAEAAVTVSYEAQARLRDPVYGCVAHIFALQQQVMTLQA 107 7***********************89************************************************************* PP DUF260 93 elallkee 100 +la+lk++ TRIDC4BG053390.4 108 QLASLKAH 115 *99875 PP

Sequence ? help Back to Top
Protein Sequence Length: 207 aa Download sequence
MEAVGHRGDT GLGSPCGACK FLRRKCARGC VFAPYFCHEQ GAAHFAAIHK VFGASNVSKL 60 LAHLPISDRA EAAVTVSYEA QARLRDPVYG CVAHIFALQQ QVMTLQAQLA SLKAHAPPAP 120 QGVQHQNDVK GYVGGGAADQ YAHGGYQWPN GNGVGAAAAQ QQCAYGGNGG AAAGHDSISA 180 LLAGSAASDY MMYHALEQSA SDDDGHA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58190.1	1e-61	LBD family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG053390.4