PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG053870.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C2H2
Protein Properties Length: 135aa    MW: 14778.3 Da    PI: 6.8857
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG053870.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.50.000213555323
                      ETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2  3 CpdCgksFsrksnLkrHirtH 23
                      C +C++ F+++  L  H++ H
  TRIDC4BG053870.1 35 CVYCDRKFRSSQALGGHQNAH 55
                      ******************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 135 aa     Download sequence    
IEQLHSEMDE HEPSLELTLR MSSAAEAEQG GFFLCVYCDR KFRSSQALGG HQNAHKHERS  60
LAHRRREMAA ATGAHGAAGT RAPAAQDERP RYVSAGDFVE PSAGKAGRTE ARAWKVAAAP  120
EYGYRADDVD LSLRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57520.13e-14C2H2 family protein