PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG053980.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 231aa    MW: 26900.4 Da    PI: 9.0161
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG053980.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM178.12.3e-5551341129
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 
                       +ppGfrFhPtdeelv +yL+kkv+++k++l +vi+++d+y++ePwdL +     ++e++ewyfFs +d+ky+tg+r+nrat +g+Wkatg+dk
  TRIDC4BG053980.1   5 VPPGFRFHPTDEELVGYYLRKKVASQKIDL-DVIRDIDLYRIEPWDLTEhcgIGYEEQNEWYFFSFKDRKYPTGTRTNRATMAGFWKATGRDK 96 
                       69****************************.9***************853543334677********************************** PP

               NAM  91 evlskkgelvglkktLvfykgrapkgektdWvmheyrle 129
                       +v++ +++l+g++ktLvfykgrap+g+ktdW+mheyrle
  TRIDC4BG053980.1  97 AVHE-RSRLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLE 134
                       ***9.999*****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MESCVPPGFR FHPTDEELVG YYLRKKVASQ KIDLDVIRDI DLYRIEPWDL TEHCGIGYEE  60
QNEWYFFSFK DRKYPTGTRT NRATMAGFWK ATGRDKAVHE RSRLIGMRKT LVFYKGRAPN  120
GQKTDWIMHE YRLETDENAP PQEEGWVVCR AFKKRTAYPN RGMMERWGSN YSYNEVNAMS  180
GAPFPDPNMA STYAAAAQMG KGASFKEEAE QLDGAAALLR YTSRRCRLRW Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18060.11e-112NAC family protein