PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG056380.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 620aa    MW: 69734 Da    PI: 6.1258
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG056380.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS326.26.6e-1002396102373
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                       ++lL++cAeav+s+d   a++lL+r++ ++sp+gd+ qRla+yf+++L+arla+++s+ly++l  ++ts    +e + a+++   +s  +k++
  TRIDC4BG056380.3 239 ETLLVRCAEAVASNDVCGASKLLERIKYHSSPTGDARQRLAHYFAQGLEARLAGTGSRLYRSLMGKRTS---AVELIRAYHVHTAASCSIKVG 328
                       789************************************************************999998...9******************** PP

              GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakr 185
                        l   ++I++av+g +++Hi+ ++is G+QWp Ll+ La+R++gpp+++iTg++ p++g   +  +ee g+rL+++A+++gvpfef++ +a++
  TRIDC4BG056380.3 329 LLFSTHTIYKAVAGRRKLHIVHYGISTGIQWPDLLRLLANREGGPPQVKITGINTPQPGpcPAALMEEAGHRLNNYASQFGVPFEFRA-IASK 420
                       ***********************************************************999999***********************.7*** PP

              GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsles..erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklp 276
                       led++ e+L+++p+E+l+V++ ++  +l+des++++   +rd vL+++++++P v+v +  +  ++++ F++rf +al+y++alfd +e+++p
  TRIDC4BG056380.3 421 LEDVRAEDLHINPDEVLVVSSLYEFRTLMDESLTSDMlsPRDMVLNTIRKMRPSVFVSSVVNGPYSAAFFMTRFRHALYYFTALFDVMETTIP 513
                       *******************************99887666****************************************************** PP

              GRAS 277 reseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvs 369
                       r+s++r  vEr +++r++ n +acega+r+er +++++W+ r ++aG++++pl+ +++   k  +++ + + +++ e++ +l++gWk+r L++
  TRIDC4BG056380.3 514 RDSDKRLLVERDIFARSAINRIACEGADRVERPQNYKEWQTRNQRAGLRQLPLDPDIVLMLKDEVKNRYHKHFMICEDHRWLLQGWKGRVLYA 606
                       *********************************************************************999********************* PP

              GRAS 370 vSaW 373
                        S W
  TRIDC4BG056380.3 607 HSTW 610
                       **** PP
Sequence ? help Back to Top
Protein Sequence    Length: 620 aa     Download sequence    
TTHGDSQNDM ALEYISRMLT EEDIVDKFFY HYPDHPKLLQ AEQPFAEILA NTSPAADQES  60
FADSTSILMP SQGNDTDVMV SGYQVQDPAF FLNDTGTVEP NGMVVFPSES STSMEFFKGM  120
EEANRFLPAD NVMVDGRGRK KRPGMDGETE AGLGRSSKQI MVVLHSATAL EEEEEEEEAE  180
ATALEMLDRL ILNGYEACPS EMQEVVRVTW EDKEDKAARQ SISRRGRRGA RHTVVTDLET  240
LLVRCAEAVA SNDVCGASKL LERIKYHSSP TGDARQRLAH YFAQGLEARL AGTGSRLYRS  300
LMGKRTSAVE LIRAYHVHTA ASCSIKVGLL FSTHTIYKAV AGRRKLHIVH YGISTGIQWP  360
DLLRLLANRE GGPPQVKITG INTPQPGPCP AALMEEAGHR LNNYASQFGV PFEFRAIASK  420
LEDVRAEDLH INPDEVLVVS SLYEFRTLMD ESLTSDMLSP RDMVLNTIRK MRPSVFVSSV  480
VNGPYSAAFF MTRFRHALYY FTALFDVMET TIPRDSDKRL LVERDIFARS AINRIACEGA  540
DRVERPQNYK EWQTRNQRAG LRQLPLDPDI VLMLKDEVKN RYHKHFMICE DHRWLLQGWK  600
GRVLYAHSTW AAGDPTGSLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G29060.11e-126GRAS family protein