PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG057710.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 360aa    MW: 39122.5 Da    PI: 6.7915
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG057710.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS320.63.3e-98232248373
              GRAS  48 ALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp 140
                       ALa+rl+  +++ + al +s+++      +   ++ f+++ P+lkf+h+taNqaIlea+eg++rvH++D+ i+qG+QWpaL+qaL+ Rp+gpp
  TRIDC4BG057710.1   2 ALAQRLFPATPHSSFALDTSPER------AGELYRQFYNAGPYLKFAHFTANQAILEAFEGCDRVHVVDLAIKQGMQWPALIQALSIRPGGPP 88 
                       88888888666666666555554......5667899********************************************************* PP

              GRAS 141 slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrll....desvsleserdevLk 229
                       s+RiTgvgs     + +  e+g rLa+fA++++vpf+f+ ++ ++l++l++++++v pgEa+aVn++ qlhr+l    + s+sl+s++d vL 
  TRIDC4BG057710.1  89 SVRITGVGS-----APAADEVGLRLAEFARAMNVPFSFQRVTDDSLDQLRPWMFQVLPGEAVAVNSICQLHRVLvnpdAASTSLPSPIDIVLG 176
                       *********.....899***********************9999*****************************9777777888889******* PP

              GRAS 230 lvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl.eaklpres.eerikvErellgreivnvvacegaerrerhetlekWrerle 320
                        + s++P+v++vveqeadhn++ +++rf +a+ yy +++ds+ +++++r     +     ++++rei n+v+ eg++r+erhe l+ W +rl 
  TRIDC4BG057710.1 177 WIASMQPRVFTVVEQEADHNKPGLVTRFENAMFYYGSVLDSMeAMSVSRRGaIGNGAGADAYVQREIFNIVCYEGSARTERHEPLAYWCSRLW 269
                       ******************************************55566665554455566778******************************* PP

              GRAS 321 eaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                       + GF+ vpl+ +aa qa   +r +++ g+rv+e  g+l l W+++pL++vS+W
  TRIDC4BG057710.1 270 RTGFTHVPLGPSAAYQAAKFVRVFSGTGFRVQEIGGCLSLAWHEHPLLTVSVW 322
                       ***************************************************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    
AALAQRLFPA TPHSSFALDT SPERAGELYR QFYNAGPYLK FAHFTANQAI LEAFEGCDRV  60
HVVDLAIKQG MQWPALIQAL SIRPGGPPSV RITGVGSAPA ADEVGLRLAE FARAMNVPFS  120
FQRVTDDSLD QLRPWMFQVL PGEAVAVNSI CQLHRVLVNP DAASTSLPSP IDIVLGWIAS  180
MQPRVFTVVE QEADHNKPGL VTRFENAMFY YGSVLDSMEA MSVSRRGAIG NGAGADAYVQ  240
REIFNIVCYE GSARTERHEP LAYWCSRLWR TGFTHVPLGP SAAYQAAKFV RVFSGTGFRV  300
QEIGGCLSLA WHEHPLLTVS VWSAMPADGA GTAKEHADKH KLKMSIGESS GGHLPDAGAQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01570.12e-84GRAS family protein