PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG058550.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 319aa    MW: 34765 Da    PI: 9.2114
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG058550.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B398.63.9e-3141145199
                       EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS. CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr. 87 
                       f+kv tpsdv+k++rlv+pk++ae++     +++ ++  l++ed+ g+ W+++++y+++s++yv+tkGW++Fvk+++L++gD+v F +  g+ 
  TRIDC4BG058550.1  41 FDKVVTPSDVGKLNRLVIPKQHAEKYfpldTSSTDKGLLLSFEDRAGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRGvGEa 133
                       89**************************99666678899************************************************665888 PP

                       SEE..EEEEE-S CS
                B3  88 sefelvvkvfrk 99 
                        +++l++ ++r+
  TRIDC4BG058550.1 134 ARGRLFIDWRRR 145
                       9999**999997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MEFTAIRAST AAAAGCSSPP PAADHKAEEE AAGAVEKEHM FDKVVTPSDV GKLNRLVIPK  60
QHAEKYFPLD TSSTDKGLLL SFEDRAGKPW RFRYSYWNSS QSYVMTKGWS RFVKEKRLDA  120
GDTVSFGRGV GEAARGRLFI DWRRRPDVVL PPGHHRGFAL PSVPFSPWMA HPAGPGGAGG  180
RMFLQATSPA TLYDYDAYQH HHQRRHIGYD GYGAAPGRQV VYYQPQQQYH HQHPSLVLES  240
VPVRMSMAAA PAHPEPSAVA TSGSKRVRLF GVNLECAADA EEDFSGPGRT ATTALQLLSP  300
ASSSSSSSGK ARCSLNLDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46870.13e-68B3 family protein