PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG058810.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 628aa MW: 69489.9 Da PI: 5.6592

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG058810.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	181.9	1.5e-56	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 lppGfrFhPtdeel+ +yLk k++g+++el e+i+evd+yk+ePwdLp k + +++ ewyfFs+rd+ky++g+r+nratk+gyWkatgkd++ TRIDC4BG058810.2 6 LPPGFRFHPTDEELIIYYLKSKINGRQIEL-EIIPEVDLYKCEPWDLPeKsFLPSKDLEWYFFSPRDRKYPNGSRTNRATKAGYWKATGKDRK 97 79**************************.99**********95334455777******************************* PP NAM 92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 v s ++++vg+kktLv+y+grap+g++tdWvmheyrl TRIDC4BG058810.2 98 VNS-QKRAVGMKKTLVYYRGRAPHGSRTDWVMHEYRL 133 .9999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 628 aa Download sequence
MAPVSLPPGF RFHPTDEELI IYYLKSKING RQIELEIIPE VDLYKCEPWD LPEKSFLPSK 60 DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS QKRAVGMKKT LVYYRGRAPH 120 GSRTDWVMHE YRLDERECEI DNGLQDAYAL CRIFKKTAPG PKIMEHYGAA QYHGEPPQWT 180 PSSVERSPTP CDGRGGGDDF ESSSFSFPTE APMTSGSMHG GGFGMQMMGG MPQEDGRWMQ 240 FLSEDAFNAT NPYFMNPAAA SNFSCLPSKV DVALECARLQ HRLTLPPLEV EDFPHDVSLD 300 TKTGILQSNP NEVDILQEFL SVASASQELI NGSGSSSYPD MWLGAGTSSG GGHYMNELSS 360 LVDLGAAKAK EEDEPGRLVE ISDMQEFKEE KKRPVENLRG VKLVNNDLGE IVVEGDESNP 420 AEGITHYPIQ DTAENSGEAG HHMTDHTTDE GGIDTAPIFS QSQPDDFALA IGFGNDGDDN 480 TDPNASFDLY GKVDVQRGLF VSRVGAAKTF FHRIEPPKKV SFHLNPAASE VSSKAIEKFH 540 YYLPVTSKVS GSGSSSSRVS VSVFGKVKAL IRGKFPTMRR PPSPQRQRPE ATVSELLQIV 600 SLLLAPKEAV AEREEEMARK KAKPGRRG

Sequence ? help Back to Top

Protein Sequence Length: 628 aa Download sequence

MAPVSLPPGF RFHPTDEELI IYYLKSKING RQIELEIIPE VDLYKCEPWD LPEKSFLPSK  60
DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS QKRAVGMKKT LVYYRGRAPH  120
GSRTDWVMHE YRLDERECEI DNGLQDAYAL CRIFKKTAPG PKIMEHYGAA QYHGEPPQWT  180
PSSVERSPTP CDGRGGGDDF ESSSFSFPTE APMTSGSMHG GGFGMQMMGG MPQEDGRWMQ  240
FLSEDAFNAT NPYFMNPAAA SNFSCLPSKV DVALECARLQ HRLTLPPLEV EDFPHDVSLD  300
TKTGILQSNP NEVDILQEFL SVASASQELI NGSGSSSYPD MWLGAGTSSG GGHYMNELSS  360
LVDLGAAKAK EEDEPGRLVE ISDMQEFKEE KKRPVENLRG VKLVNNDLGE IVVEGDESNP  420
AEGITHYPIQ DTAENSGEAG HHMTDHTTDE GGIDTAPIFS QSQPDDFALA IGFGNDGDDN  480
TDPNASFDLY GKVDVQRGLF VSRVGAAKTF FHRIEPPKKV SFHLNPAASE VSSKAIEKFH  540
YYLPVTSKVS GSGSSSSRVS VSVFGKVKAL IRGKFPTMRR PPSPQRQRPE ATVSELLQIV  600
SLLLAPKEAV AEREEEMARK KAKPGRRG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	1e-128	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG058810.2