PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG058810.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 496aa    MW: 55026.2 Da    PI: 4.6261
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG058810.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM182.51e-5661331128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 
                       lppGfrFhPtdeel+ +yLk k++g+++el e+i+evd+yk+ePwdLp k  + +++ ewyfFs+rd+ky++g+r+nratk+gyWkatgkd++
  TRIDC4BG058810.3   6 LPPGFRFHPTDEELIIYYLKSKINGRQIEL-EIIPEVDLYKCEPWDLPeKsFLPSKDLEWYFFSPRDRKYPNGSRTNRATKAGYWKATGKDRK 97 
                       79****************************.99**************95334455777*********************************** PP

               NAM  92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                       v s ++++vg+kktLv+y+grap+g++tdWvmheyrl
  TRIDC4BG058810.3  98 VNS-QKRAVGMKKTLVYYRGRAPHGSRTDWVMHEYRL 133
                       ***.9999***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 496 aa     Download sequence    
MAPVSLPPGF RFHPTDEELI IYYLKSKING RQIELEIIPE VDLYKCEPWD LPEKSFLPSK  60
DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS QKRAVGMKKT LVYYRGRAPH  120
GSRTDWVMHE YRLDERECEI DNGLQDAYAL CRIFKKTAPG PKIMEHYGAA QYHGEPPQWT  180
PSSVERSPTP CDGRGGGDDF ESSSFSFPTE APMTSGSMHG GGFGMQMMGG MPQEDGRWMQ  240
FLSEDAFNAT NPYFMNPAAA SNFSCLPSKV DVALECARLQ HRLTLPPLEV EDFPHDVSLD  300
TKTGILQSNP NEVDILQEFL SVASASQELI NGSGSSSYPD MWLGAGTSSG GGHYMNELSS  360
LVDLGAAKAK EEVDNFYHMC GIGASMTRRD DEPGRLVEIS DMQEFKEEKK RPVENLRGVK  420
LVNNDLGEIV VEGDESNPAE GITHYPIQDT AENSGEAGHH MTDHTTDEGG IDTAPIFSQS  480
QPDDFALAIG FGNDGD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G65910.11e-116NAC family protein