PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG058810.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 470aa MW: 52693.9 Da PI: 5.0931

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG058810.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	182.7	9.2e-57	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 lppGfrFhPtdeel+ +yLk k++g+++el e+i+evd+yk+ePwdLp k + +++ ewyfFs+rd+ky++g+r+nratk+gyWkatgkd++ TRIDC4BG058810.4 6 LPPGFRFHPTDEELIIYYLKSKINGRQIEL-EIIPEVDLYKCEPWDLPeKsFLPSKDLEWYFFSPRDRKYPNGSRTNRATKAGYWKATGKDRK 97 79**************************.99**********95334455777******************************* PP NAM 92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 v s ++++vg+kktLv+y+grap+g++tdWvmheyrl TRIDC4BG058810.4 98 VNS-QKRAVGMKKTLVYYRGRAPHGSRTDWVMHEYRL 133 .9999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 470 aa Download sequence
MAPVSLPPGF RFHPTDEELI IYYLKSKING RQIELEIIPE VDLYKCEPWD LPEKSFLPSK 60 DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS QKRAVGMKKT LVYYRGRAPH 120 GSRTDWVMHE YRLDERECEI DNGLQIQDAY ALCRIFKKTA PGPKIMEHYG AAQYHGEPPQ 180 WTPSSVERSP TPCDGRGGGD DFESSSFSFP TEAPMTSGSM HGGGFGMQMM GGMPQEDGRW 240 MQFLSEDAFN ATNPYFMNPA AASNFSCLPS KVDVALECAR LQHRLTLPPL EVEDFPHDVS 300 LDTKTGILQS NPNEVDILQE FLSVASASQE LINGSGSSSY PDMWLGAGTS SGGGHYMNEL 360 SSLVDLGAAK AKEEVDNFYH MCGIGASMTR RDDEPGRLVE ISDMQEFKEE KKRPVENLRG 420 VKLVNNDLGE IVVEGDESNP AEGITHYPIQ DTAENSDCRR SRSPHDRSYH

Sequence ? help Back to Top

Protein Sequence Length: 470 aa Download sequence

MAPVSLPPGF RFHPTDEELI IYYLKSKING RQIELEIIPE VDLYKCEPWD LPEKSFLPSK  60
DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS QKRAVGMKKT LVYYRGRAPH  120
GSRTDWVMHE YRLDERECEI DNGLQIQDAY ALCRIFKKTA PGPKIMEHYG AAQYHGEPPQ  180
WTPSSVERSP TPCDGRGGGD DFESSSFSFP TEAPMTSGSM HGGGFGMQMM GGMPQEDGRW  240
MQFLSEDAFN ATNPYFMNPA AASNFSCLPS KVDVALECAR LQHRLTLPPL EVEDFPHDVS  300
LDTKTGILQS NPNEVDILQE FLSVASASQE LINGSGSSSY PDMWLGAGTS SGGGHYMNEL  360
SSLVDLGAAK AKEEVDNFYH MCGIGASMTR RDDEPGRLVE ISDMQEFKEE KKRPVENLRG  420
VKLVNNDLGE IVVEGDESNP AEGITHYPIQ DTAENSDCRR SRSPHDRSYH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	1e-114	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG058810.4