PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG058890.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family M-type_MADS
Protein Properties Length: 148aa    MW: 16753.8 Da    PI: 10.0535
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG058890.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF65.84.4e-2168117251
                       ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF   2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 
                       rie+ + rqv fskRr g++KKA+E   L daeva+++fs+ g+lyey+s
  TRIDC4BG058890.1  68 RIEDRTSRQVRFSKRRLGLFKKAFEFGLLYDAEVALLVFSPAGRLYEYAS 117
                       8***********************************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 148 aa     Download sequence    
LSAHWRAHAD ISAWWFVNLM EGPVPSLSLI FARSSPHPIS ERHTPASERQ PEEARRGMVR  60
RGPVELRRIE DRTSRQVRFS KRRLGLFKKA FEFGLLYDAE VALLVFSPAG RLYEYASSSI  120
EDTYDRYQAF GGAGKNLNEG GASTNNVN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45660.15e-28MIKC_MADS family protein