PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG058890.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family M-type_MADS
Protein Properties Length: 84aa    MW: 9590.27 Da    PI: 11.9116
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG058890.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF60.71.7e-191157248
                      ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEE CS
            SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklye 48
                      rie+ + rqv fskRr g++KKA+E   L daeva+++fs+ g+ly+
  TRIDC4BG058890.3 11 RIEDRTSRQVRFSKRRLGLFKKAFEFGLLYDAEVALLVFSPAGRLYD 57
                      8********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 84 aa     Download sequence    
MVRRGPVELR RIEDRTSRQV RFSKRRLGLF KKAFEFGLLY DAEVALLVFS PAGRLYDQSL  60
PKSISNRHPK TAPHAKIRVI LGAG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11880.12e-22MIKC_MADS family protein