PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG060890.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 235aa    MW: 25541.9 Da    PI: 6.4177
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG060890.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.66.9e-114187455
                      HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                      ++ ++Er RR+ +N+++  Lr+++P+      +K++Ka+i + A+ YI +Lq
  TRIDC4BG060890.1 41 KNIINERHRRRMLNEKLYALRRVVPNI-----TKMDKASIIQDAIAYIEELQ 87
                      57799*********************7.....7******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MDCCSMHLPA EDSLSGLYDD STSSPDGATS RSTKASSLER KNIINERHRR RMLNEKLYAL  60
RRVVPNITKM DKASIIQDAI AYIEELQEQE RQILAALRTD SCTAVVKADD AASTGSNAED  120
HGVGSSPRKK MRRTTSASSI NGAFSSPNPH PVQILELEVT QVAEELTMVS MRHGNAHEAT  180
AKVCEALDSL CLKVISTSIT AVASGIVHNM FVETEGMHGA QTIKEMIQTH SAISM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.32e-34bHLH family protein