PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG060890.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 243aa    MW: 26401.8 Da    PI: 5.813
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG060890.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.57.3e-114995455
                      HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                      ++ ++Er RR+ +N+++  Lr+++P+      +K++Ka+i + A+ YI +Lq
  TRIDC4BG060890.2 49 KNIINERHRRRMLNEKLYALRRVVPNI-----TKMDKASIIQDAIAYIEELQ 95
                      57799*********************7.....7******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
WEALVLELGD ADSMHLPAED SLSGLYDDST SSPDGATSRS TKASSLERKN IINERHRRRM  60
LNEKLYALRR VVPNITKMDK ASIIQDAIAY IEELQEQERQ ILAALRTDSC TAVVKADDAA  120
STGSNAEDHG VGSSPRKKMR RTTSASSING AFSSPNPHPV QILELEVTQV AEELTMVSMR  180
HGNAHEATAK VCEALDSLCL KVISTSITAV ASGIVHNMFV ETEGMHGAQT IKEMIQTHSA  240
ISM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.12e-34bHLH family protein