PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG060980.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 122aa    MW: 13811.5 Da    PI: 4.324
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG060980.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.61.6e-1163105855
                       HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +Er RR+r+N+++  +r ++P+      +K++Ka+i + A+ YI +Lq
  TRIDC4BG060980.1  63 NERDRRRRLNEKLYAIRGVVPNI-----TKMNKASIIQDAIAYIEELQ 105
                       7*********************7.....7******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 122 aa     Download sequence    
MDDMEMSLDF SWETPSFFEL CGADSMHLPA EDSLSCLYDD STSSPDGASS GLTRRWAGRN  60
MLNERDRRRR LNEKLYAIRG VVPNITKMNK ASIIQDAIAY IEELQEQERQ ILAAPEPMAV  120
PP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.18e-13bHLH family protein