PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG062640.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HSF
Protein Properties Length: 216aa    MW: 24419.4 Da    PI: 5.3865
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG062640.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind77.52.2e-2427125103
                       SSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXXXXXXX CS
      HSF_DNA-bind  25 gnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekikrkkse 103
                       +nsfvv d+  f++ +Lp +Fkhsnf+SFvRQLn+YgF+kv+ ++         weF+h sF +g+++ll +i r++s+
  TRIDC4BG062640.1   2 SNSFVVADPFAFSEMLLPAHFKHSNFSSFVRQLNTYGFRKVDPDR---------WEFAHASFLRGQTHLLPRIVRRRST 71 
                       589***************************************999.........********************99875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
ASNSFVVADP FAFSEMLLPA HFKHSNFSSF VRQLNTYGFR KVDPDRWEFA HASFLRGQTH  60
LLPRIVRRRS TTRPSKDDNE GEDEDTSSTM LAMEVVRLKQ EQRATEDRLA AMWRRVQDAE  120
RRPKLMLAFL LKVVRDPDVL RRLVGNSSTD AGLFPGEGVE AKRPRLLLNG EVQMQDAFMG  180
EPGVDFTGFY TGGDGFSDVP VDDDPPYAFP LNDGGY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24520.14e-41HSF family protein