PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG062640.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HSF
Protein Properties Length: 136aa    MW: 15095 Da    PI: 7.6318
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG062640.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind103.51.8e-32121032102
                       HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS
      HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 
                       F+ k+y +++d++++ ++ w   +nsfvv d+  f++ +Lp +Fkhsnf+SFvRQLn+YgF+kv+ ++         weF+h  F +g+++ll
  TRIDC4BG062640.2  12 FVAKTYAMVDDPATDAVVGWGPASNSFVVADPFAFSEMLLPAHFKHSNFSSFVRQLNTYGFRKVDPDR---------WEFAHACFLRGQTHLL 95 
                       9********************999*****************************************999.........**************** PP

                       XXXXXXXX CS
      HSF_DNA-bind  95 ekikrkks 102
                        +i r++s
  TRIDC4BG062640.2  96 PRIVRRRS 103
                       ****9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 136 aa     Download sequence    
KMSSGGGMVA PFVAKTYAMV DDPATDAVVG WGPASNSFVV ADPFAFSEML LPAHFKHSNF  60
SSFVRQLNTY GFRKVDPDRW EFAHACFLRG QTHLLPRIVR RRSGGKRGKE DADEEDDDIS  120
TKMRDATNQT LHTAPC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24520.18e-50HSF family protein