PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG062640.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HSF
Protein Properties Length: 264aa    MW: 29500.4 Da    PI: 6.5359
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG062640.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind101.11e-31111022102
                       HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS
      HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 
                       F+ k+y +++d++++ ++ w   +nsfvv d+  f++ +Lp +Fkhsnf+SFvRQLn+YgF+kv+ ++         weF+h  F +g+++ll
  TRIDC4BG062640.5  11 FVAKTYAMVDDPATDAVVGWGPASNSFVVADPFAFSEMLLPAHFKHSNFSSFVRQLNTYGFRKVDPDR---------WEFAHACFLRGQTHLL 94 
                       9********************999*****************************************999.........**************** PP

                       XXXXXXXX CS
      HSF_DNA-bind  95 ekikrkks 102
                        +i r++s
  TRIDC4BG062640.5  95 PRIVRRRS 102
                       ***99976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
MSSGGGMVAP FVAKTYAMVD DPATDAVVGW GPASNSFVVA DPFAFSEMLL PAHFKHSNFS  60
SFVRQLNTYG FRKVDPDRWE FAHACFLRGQ THLLPRIVRR RSGGKRGKED ADEEDDDIST  120
KMLAMEVVRL KEEQRATEDR LAAMWRRVQD AERRPKLMLA FLLKVVGDPD VLRRLVGNSG  180
CNDGLFPGEG AEAKRPRLLL DGEAQVSKKK MRVDGDGLLY GINRQEAFVR EPRVDFTGFY  240
TGGDGFSEVP VDDPPYAFRV DTGY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24520.19e-66HSF family protein