PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG063840.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 407aa MW: 45597.3 Da PI: 4.9133

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG063840.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.9	3.7e-13	221	268	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 ++h ErrRR+++N+ f L++++P+ + K++Ka+iL +++ Y+++L+ TRIDC4BG063840.1 221 KTHVLSERRRREKLNDMFLVLKSMIPSiN------KMDKASILAETITYLRELE 268 58999********************77......**************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence
MMLAHATGRL NQTAPIQTVV CIPFMGGVLE LGTSDLVLED PNMVNQIGTS FWELPFSACS 60 ESEVPSSSPS TNETGNGEVD IVMLEDLDHN VVDGMISKLG EVECMSDINL DHVSEEVDKF 120 YGLIKELDMR SLEDNWVMER SFEYMSSLEM APDMDAPSID DAVITLSSFV KGSHPSCFTV 180 WKRSSDWEHV VARVTGESQK LLKKAVAGGA WIARPQESNI KTHVLSERRR REKLNDMFLV 240 LKSMIPSINK MDKASILAET ITYLRELEQR VEELQSSRTP SLRPNEAPGQ GLHEVVGKKK 300 IKLSTRSKRK ALEMEREDDD CPNNVVNVTV MEKEVLLEVQ CRWKELLMTR VFDVIKSLRL 360 DIVSMHASTP EGHLDLKIRA TQQFAVGYAA IAPGMITEAL QKAICNR

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence

MMLAHATGRL NQTAPIQTVV CIPFMGGVLE LGTSDLVLED PNMVNQIGTS FWELPFSACS  60
ESEVPSSSPS TNETGNGEVD IVMLEDLDHN VVDGMISKLG EVECMSDINL DHVSEEVDKF  120
YGLIKELDMR SLEDNWVMER SFEYMSSLEM APDMDAPSID DAVITLSSFV KGSHPSCFTV  180
WKRSSDWEHV VARVTGESQK LLKKAVAGGA WIARPQESNI KTHVLSERRR REKLNDMFLV  240
LKSMIPSINK MDKASILAET ITYLRELEQR VEELQSSRTP SLRPNEAPGQ GLHEVVGKKK  300
IKLSTRSKRK ALEMEREDDD CPNNVVNVTV MEKEVLLEVQ CRWKELLMTR VFDVIKSLRL  360
DIVSMHASTP EGHLDLKIRA TQQFAVGYAA IAPGMITEAL QKAICNR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	227	232	ERRRRE
2	228	233	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G09820.1	7e-27	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG063840.1