PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG000380.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family TCP
Protein Properties Length: 203aa    MW: 22198.9 Da    PI: 11.036
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG000380.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP135.73.9e-42391961134
               TCP   1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.................ssssasec... 73 
                       aa++kdrhski+T++g+RdRR+Rls+++a+rfF+Lqd+LGfdk+skt++WLl  + + i  l+ +                 ++++a+++   
  TRIDC5AG000380.1  39 AAARKDRHSKICTAGGMRDRRMRLSLDVARRFFALQDKLGFDKASKTVQWLLDRSTAGINHLAASmslseedvdgsvlldldNNDHAMAMaad 131
                       589***********************************************************************9999999855555444432 PP

               TCP  74 ...eaesssssasnsssg......kaaksaa.kskksqksaasalnlakesrakarararertrekmrikn 134
                          +++++++       +      ++a++ + ++kks++ +a +l ++k sra+ar+rarert+e++r+++
  TRIDC5AG000380.1 132 aetNKQQEQEH------QtakakrRSAPAVPsPRKKSSNGSAPVLLPDKASRARARERARERTKERNRLRS 196
                       22122222222......123445567777776888888899999999*******************99886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
AFSSYYYYPP LAAAAAAAAT TDNPTPPAVS RSRASRSRAA ARKDRHSKIC TAGGMRDRRM  60
RLSLDVARRF FALQDKLGFD KASKTVQWLL DRSTAGINHL AASMSLSEED VDGSVLLDLD  120
NNDHAMAMAA DAETNKQQEQ EHQTAKAKRR SAPAVPSPRK KSSNGSAPVL LPDKASRARA  180
RERARERTKE RNRLRSEAPA PAP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1177187RARARERARER
2177189RARARERARERTK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68800.11e-23TCP family protein