PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG003020.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 319aa    MW: 36806.3 Da    PI: 6.8877
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG003020.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA54.31.8e-17241275135
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                       C++C + +Tp+WR+gp g+ktLCnaCG++y++ +l
  TRIDC5AG003020.1 241 CTHCLSHTTPQWRSGPLGPKTLCNACGVRYKSGRL 275
                       *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
QEPAMESEDS STEWLSIYLE DCLTNPASYP VSEEQASVNP NLPHPSSSNP RRKKRSLASV  60
IRDSDEEYFL IVEPPLLLDQ KHWLAESELI LPKKDKDQEL VQKLEQEHEE EYKPYTVQFK  120
QEQAVMRCSI CLSNSNQTPQ QWQGGPSGAL LCNTCSLRLK AGNGFIKLER CGQQVDEEQD  180
HGRGQDKRKI KKTTYYGDDE EPPQEKRRIK KTSFVDEQGK RRTKKTYVNE EVPLEEPVKR  240
CTHCLSHTTP QWRSGPLGPK TLCNACGVRY KSGRLLPEYR PANSPTFVSF MHSNSHKKVM  300
QMRKSVENEH EHEYSHSDM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60530.15e-36GATA family protein