PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG003020.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 169aa    MW: 19226.8 Da    PI: 9.5373
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG003020.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.76.8e-1899133135
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                       C++C + +Tp+WR+gp g+ktLCnaCG++y++ +l
  TRIDC5AG003020.3  99 CTHCLSHTTPQWRSGPLGPKTLCNACGVRYKSGRL 133
                       *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    
MRCSICLSNS NQTPQQWQGG PSGALLCNTC SLRLKAGNGF IKLERCGQQV DEEQDHGRGQ  60
DKRKIKKTTY YGDDEQGKRR TKKTYVNEEV PLEEPVKRCT HCLSHTTPQW RSGPLGPKTL  120
CNACGVRYKS GRLLPEYRPA NSPTFVSFMH SNSHKKVMQM RKSVENEHE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16283KRKIKKTTYYGDDEQGKRRTKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60530.14e-37GATA family protein