PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG003020.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 194aa    MW: 22283.2 Da    PI: 9.3049
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG003020.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.48.6e-18116150135
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                       C++C + +Tp+WR+gp g+ktLCnaCG++y++ +l
  TRIDC5AG003020.4 116 CTHCLSHTTPQWRSGPLGPKTLCNACGVRYKSGRL 150
                       *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    
MRCSICLSNS NQTPQQWQGG PSGALLCNTC SLRLKAGNGF IKLERCGQQV DEEQDHGRGQ  60
DKRKIKKTTY YGDDEEPPQE KRRIKKTSFV DEQGKRRTKK TYVNEEVPLE EPVKRCTHCL  120
SHTTPQWRSG PLGPKTLCNA CGVRYKSGRL LPEYRPANSP TFVSFMHSNS HKKVMQMRKS  180
VENEHEHEYS HSDM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60530.18e-37GATA family protein