PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG003850.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

YABBY

Protein Properties

Length: 207aa MW: 22915.8 Da PI: 8.8353

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG003850.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	229.1	1.1e-70	9	180	6	170
YABBY 6 sseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasql.laaeshldeslkee...lleelkveeenlksnv..ekeesa 92 +e+vCyv+CnfCnt+lavsvP +s++++vtvrCGhCt+llsv+l+ +++ ++ +++es + + +++++ ++ + ++++s+ TRIDC5AG003850.3 9 PAEEVCYVHCNFCNTVLAVSVPGNSMLNIVTVRCGHCTNLLSVSLRGQMHSpVPPAPQVQESSLSKpngMNSFIRDHSSVYNNPEfgSSSSSS 101 6899***************************************987754266667777776655466444444444444433311333344 PP YABBY 93 stsvsseklsenedeevprvpp.virPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 s++ ++ ++ ++++++ + + rPPekrqrvPsaynrfikeei+rika+nPdishreafs+aaknWah+P+ihfgl TRIDC5AG003850.3 102 SSKFRMPTMMFSSQNDLLQEQTlHARPPEKRQRVPSAYNRFIKEEIRRIKANNPDISHREAFSTAAKNWAHYPNIHFGL 180 4444555555555555555444479**************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 207 aa Download sequence
MSSSGQITPA EEVCYVHCNF CNTVLAVSVP GNSMLNIVTV RCGHCTNLLS VSLRGQMHSP 60 VPPAPQVQES SLSKPNGMNS FIRDHSSVYN NPEFGSSSSS SSSKFRMPTM MFSSQNDLLQ 120 EQTLHARPPE KRQRVPSAYN RFIKEEIRRI KANNPDISHR EAFSTAAKNW AHYPNIHFGL 180 NPERDDGKRL AVDDAAPAAK KIHGFCS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26580.1	1e-58	YABBY family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG003850.3