PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG003850.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family YABBY
Protein Properties Length: 158aa    MW: 17864.1 Da    PI: 10.1831
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG003850.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY174.37.6e-54114531170
             YABBY  31 lfkvvtvrCGhCtsllsvnlakasql..laaeshldeslkee.lleelkveeenlksnv..ekeesastsvsseklsenedeevprvpp.vir 117
                       ++++vtvrCGhCt+llsv+l+ +++    +a ++ +   k++ +    +++++ ++  +  ++++s+s++ ++ ++  ++++++ + +    r
  TRIDC5AG003850.4   1 MLNIVTVRCGHCTNLLSVSLRGQMHSpvPPAPQE-SSLSKPNgMNSFIRDHSSVYNNPEfgSSSSSSSSKFRMPTMMFSSQNDLLQEQTlHAR 92 
                       579*****************98876411344443.222333334444444444444333113344444445555555555555555444479* PP

             YABBY 118 PPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                       PPekrqrvPsaynrfikeei+rika+nPdishreafs+aaknWah+P+ihfgl
  TRIDC5AG003850.4  93 PPEKRQRVPSAYNRFIKEEIRRIKANNPDISHREAFSTAAKNWAHYPNIHFGL 145
                       ***************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 158 aa     Download sequence    
MLNIVTVRCG HCTNLLSVSL RGQMHSPVPP APQESSLSKP NGMNSFIRDH SSVYNNPEFG  60
SSSSSSSSKF RMPTMMFSSQ NDLLQEQTLH ARPPEKRQRV PSAYNRFIKE EIRRIKANNP  120
DISHREAFST AAKNWAHYPN IHFGLNPERD DGKRLAVD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26580.15e-46YABBY family protein