PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG004160.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 739aa MW: 85769.2 Da PI: 8.0762

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG004160.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	62.5	1.3e-19	104	185	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fY++YA +GF ++++++++ +k++ C+++gk+++ ++ +++r+ ++ +rt+C+ak+ vk++ +g+we +++++eHnH+l+p TRIDC5AG004160.3 104 FYSTYALLTGFVAKRNSNYRR------KKYHIECNRSGKPTPARNP-NRKRKINSFERTNCQAKVIVKLT-KGQWEFATVRNEHNHPLSP 185 9**************9999......5789*******9998.9******************.9*************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 739 aa Download sequence
MQELSSDSIE KNTDGILADE ADKETNSVDH SLQQAKEQNQ LHDNVENNEM VNRNPSESDS 60 DSSSGSDSDS ELGKYFYPKF EELEAARKPE PGMKFQTLED ANGFYSTYAL LTGFVAKRNS 120 NYRRKKYHIE CNRSGKPTPA RNPNRKRKIN SFERTNCQAK VIVKLTKGQW EFATVRNEHN 180 HPLSPNPSLA RFFLSQKHMS SEEKSFLKVL QQSKIPPNKI LRIFRRMRSS FGNISFKKQD 240 PVSSVRSSSE NIPSKKKDPI SLQCTEQRKT ENSDVESALK HFKELELRNP SFFYIKQTDE 300 DNIVRSIFWT DARSRMDYDI FGDFISVDTT YTTNRHNLPV ATIIGINNHG RTLLLGCALL 360 RDGKAETFKW MFQTLLQVMG GKISESIITN QDEPLGRAIA EVLPQVRLRF WKCDVMGKAH 420 ERIAAFMAAR GNIKLELDSL VDNSLTEMEF EEGWSSLIER YDASKNEYLQ FMWRIRKIWA 480 PVYFRQDFYP FAESLGRSEG MNIVLFRNYV LPKDRIEKFI ERYEEIQKTT LKTDDEDRRQ 540 AGTVPSCFSL QPIEKHASTI YTRQIFLKVQ RELLHSTAFD VHVVKKGSVY RLERVFNYEN 600 PEFDRNAFEV FVDPVSNTFI CQCAKFARDR LLCCHIFRLF TQLGINEIPA QYIVPRWTDK 660 FKEEKAKQYT EKCLEKADST ARYEMLMSKM ADLSKKICSD GTKCNTFMLE FDSIQEKLLA 720 TEGENPRNND NCMEIITTS

Sequence ? help Back to Top

Protein Sequence Length: 739 aa Download sequence

MQELSSDSIE KNTDGILADE ADKETNSVDH SLQQAKEQNQ LHDNVENNEM VNRNPSESDS  60
DSSSGSDSDS ELGKYFYPKF EELEAARKPE PGMKFQTLED ANGFYSTYAL LTGFVAKRNS  120
NYRRKKYHIE CNRSGKPTPA RNPNRKRKIN SFERTNCQAK VIVKLTKGQW EFATVRNEHN  180
HPLSPNPSLA RFFLSQKHMS SEEKSFLKVL QQSKIPPNKI LRIFRRMRSS FGNISFKKQD  240
PVSSVRSSSE NIPSKKKDPI SLQCTEQRKT ENSDVESALK HFKELELRNP SFFYIKQTDE  300
DNIVRSIFWT DARSRMDYDI FGDFISVDTT YTTNRHNLPV ATIIGINNHG RTLLLGCALL  360
RDGKAETFKW MFQTLLQVMG GKISESIITN QDEPLGRAIA EVLPQVRLRF WKCDVMGKAH  420
ERIAAFMAAR GNIKLELDSL VDNSLTEMEF EEGWSSLIER YDASKNEYLQ FMWRIRKIWA  480
PVYFRQDFYP FAESLGRSEG MNIVLFRNYV LPKDRIEKFI ERYEEIQKTT LKTDDEDRRQ  540
AGTVPSCFSL QPIEKHASTI YTRQIFLKVQ RELLHSTAFD VHVVKKGSVY RLERVFNYEN  600
PEFDRNAFEV FVDPVSNTFI CQCAKFARDR LLCCHIFRLF TQLGINEIPA QYIVPRWTDK  660
FKEEKAKQYT EKCLEKADST ARYEMLMSKM ADLSKKICSD GTKCNTFMLE FDSIQEKLLA  720
TEGENPRNND NCMEIITTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-72	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG004160.3