PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG004270.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YA
Protein Properties Length: 180aa    MW: 19987.5 Da    PI: 10.1986
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG004270.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA101.39.4e-321571158
         CBFB_NFYA  1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58
                      d+p+YVNaKQy++Il+RR +Rak+e+e++l  k+rkpylheSRh hA+rR+RgsgGrF
  TRIDC5AG004270.3 15 DAPIYVNAKQYEGILRRRRARAKAEKENRL-VKARKPYLHESRHLHAMRRARGSGGRF 71
                      68****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
ESSGRMLIPL NMPADAPIYV NAKQYEGILR RRRARAKAEK ENRLVKARKP YLHESRHLHA  60
MRRARGSGGR FLNTKKETNG KDTGVGSKAM VGNRLMRSAA SLSSEIQHSE QGNPSSVSSM  120
SGSEVTSLYD HEDVDHYHNF EHLRTHFFTP LPSIMDGEHG AGNPFKWAAA SDGCCNLLKA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G14020.13e-26NF-YA family protein