PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG004710.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family TCP
Protein Properties Length: 297aa    MW: 32260.8 Da    PI: 7.1072
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG004710.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP106.25e-3335165189
               TCP   1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.........................sss 68 
                       aag+kdrhsk+ T++g+RdRR+Rls+++a++f+d+qd+LG+d++sk+ieWL+q+a +ai+ l+++                         +  
  TRIDC5AG004710.2  35 AAGGKDRHSKVVTSRGLRDRRIRLSVQTAIQFYDIQDRLGVDQPSKAIEWLIQAAATAIDGLPSLdcsfalpvaspaaedavevstsetsK-- 125
                       6899*************************************************************99888876444444443333322220.. PP

               TCP  69 saseceaesssssasnsssg......................................k 89 
                                          g                                      +
  TRIDC5AG004710.2 126 -------------------GsvlslangpadndnaahqanaynggsangtfaellhcsN 165
                       ...................2222222223322333333333444444555555544320 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MEEADKDRNS CKCLRAVGGG DSADAWRTFR VARAAAGGKD RHSKVVTSRG LRDRRIRLSV  60
QTAIQFYDIQ DRLGVDQPSK AIEWLIQAAA TAIDGLPSLD CSFALPVASP AAEDAVEVST  120
SETSKGSVLS LANGPADNDN AAHQANAYNG GSANGTFAEL LHCSNAADKP MQHQQQQPTL  180
AYYAAPGSHI APMSFEMIPQ LTFSQDQQHR HHHHHHHHHA SVVFDRSTLQ SNTVSTPQWP  240
PSQHPFLMQR FSAAPAEPSP MFPFFLGGNS AAAAAPAAAN APERRLQLWD FKEERKT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30210.23e-32TCP family protein