PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG004710.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family TCP
Protein Properties Length: 249aa    MW: 27141.1 Da    PI: 6.6767
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG004710.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP82.69.6e-2621241689
               TCP  16 ggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.........................ssssaseceaesssssas 83 
                       g+RdRR+Rls+++a++f+d+qd+LG+d++sk+ieWL+q+a +ai+ l+++                         +                 
  TRIDC5AG004710.3   2 GLRDRRIRLSVQTAIQFYDIQDRLGVDQPSKAIEWLIQAAATAIDGLPSLdcsfalpvaspaaedavevstsetsK----------------- 77 
                       89************************************************99888877444444444333322220................. PP

               TCP  84 nsssg.............................................k 89 
                           g                                             +
  TRIDC5AG004710.3  78 ----GsvlslangpadndnaahqanaynggsangtfaellhcsnaadkpmQ 124
                       ....22222222233223333333334444455555555443322222220 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
RGLRDRRIRL SVQTAIQFYD IQDRLGVDQP SKAIEWLIQA AATAIDGLPS LDCSFALPVA  60
SPAAEDAVEV STSETSKGSV LSLANGPADN DNAAHQANAY NGGSANGTFA ELLHCSNAAD  120
KPMQHQQQQP TLAYYAAPGS HIAPMSFEMI PQLTFSQDQQ HRHHHHHHHH HASVVFDRST  180
LQSNTVSTPQ WPPSQHPFLM QRFSAAPAEP SPMFPFFLGG NSAAAAAPAA ANAPERRLQL  240
WDFKEERKT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30210.25e-22TCP family protein