PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG006300.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 122aa    MW: 13431.2 Da    PI: 10.5692
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG006300.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding35.62.1e-11556147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqky 47
                      +++WT+eE+  l+ ++ ++G g W+tI +          R+  ++k++w++ 
  TRIDC5AG006300.5  5 KQKWTAEEEAALKAGIGKHGAGKWRTILKDPEfsnilRYRSNVDLKDKWRNM 56
                      79***********************************99***********95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 122 aa     Download sequence    
MGAPKQKWTA EEEAALKAGI GKHGAGKWRT ILKDPEFSNI LRYRSNVDLK DKWRNMNVTV  60
NASGTRDKVR TTTTTTPTAK KPRSAPKQEN HPTAITTITS DGDDDVVDVK PIIKPIVTFT  120
TG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49950.16e-34MYB_related family protein