PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG006660.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YA
Protein Properties Length: 210aa    MW: 22770.1 Da    PI: 9.1919
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG006660.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA104.31.1e-32106162158
         CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                       +ep+YVNaKQy++Il+RRq+Rak+e+e+kl +k+rkpylheSRh+hAl+R+Rg gGrF
  TRIDC5AG006660.4 106 EEPVYVNAKQYNAILRRRQSRAKAESERKL-IKGRKPYLHESRHQHALKRARGAGGRF 162
                       69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
HFYATISRAG DHRADEQQKQ AAAQGNQEEA PATSIGSQAM VATPSTDYVT PYGHQEACHA  60
MGQIAYPTVD PFYGSLYAAY GGQPMMHPPM VGMHAAAIPL PTDAIEEPVY VNAKQYNAIL  120
RRRQSRAKAE SERKLIKGRK PYLHESRHQH ALKRARGAGG RFLNAKSDDN EEHSDSSSKD  180
KQNGVAPRSS GQSSQSPKGA TSADKSGNHE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30500.22e-39NF-YA family protein