PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG006670.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HB-other
Protein Properties Length: 132aa    MW: 14757.9 Da    PI: 11.0024
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG006670.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox54.71.7e-1780132452
                       -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHH CS
          Homeobox   4 RttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrR 52 
                         ++t+eq+e+Le++++++++ps  +r+++ + +    +++ +q+kvWFqNrR
  TRIDC5AG006670.2  80 YVRYTPEQVEALERVYNECPKPSSLRRQQIIRDCpilcNIEPKQIKVWFQNRR 132
                       6789************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 132 aa     Download sequence    
KKPESERHGD PPQRSTPRSL LSLPQAMTRH RPWPPSHPPP PPHPHPLRAA AAAATGSGGG  60
KKMARLSPGA AAPQVDTGKY VRYTPEQVEA LERVYNECPK PSSLRRQQII RDCPILCNIE  120
PKQIKVWFQN RR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30490.12e-33HD-ZIP family protein