PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG006720.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 818aa MW: 93714.2 Da PI: 4.826

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG006720.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	78.7	1.1e-24	96	183	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 Y+eY++++GFsvrk k+++ + ++ i +++++Cskeg +++e+ + +++ +++etrt+Cka+++ + +++g+w+v+++ eHnHel+p TRIDC5AG006720.3 96 LYCEYGHRMGFSVRKGKQYYFTGTKVIRTKDYYCSKEGLKDDEQLT--EANFNKPETRTNCKAMVRFRVDSEGQWRVIQIIPEHNHELVP 183 7***************************************9988..9999**********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 818 aa Download sequence
EMEGTSVPIE IDGDAICLEN VGDDEHEAQE SEQVQIIYAT ENGAQVAFDS QEQGTEEHSV 60 RSEEEQENNS VIPSREEFTE ELRTKVAYSE EQAYRLYCEY GHRMGFSVRK GKQYYFTGTK 120 VIRTKDYYCS KEGLKDDEQL TEANFNKPET RTNCKAMVRF RVDSEGQWRV IQIIPEHNHE 180 LVPPEEIHLL RSVRILSIPK PGTLNAMVNA EIQSMHDSLH VHDDGAECHS QVSIQSYALL 240 EPEDAEALVG YLKRRTIEQG MFYWDVQVDQ EGQMTNFFWR DGRSRVDYDC FGDVVVFDTS 300 YRTNKYNMIC APFVGINHHM QNVMFGCAFM LDESLTSYEW LLKSFLESMG GCPPKTIFTD 360 QNDTISKAIE VILPETCHCL CQWHIEKNLQ AHLDTPNASG TFHSMFMKCM KDCESETEFE 420 ETWAMMLQEH NLQDDQWLTD LFEQRHKWCT ALHKVAFDCG IRSLDRNFSS DNVLGSIADE 480 STSPTNFALE FDKLVGSWRT NESVDDIQCK QISPECSVKQ NSILQHAAEV YTHKVYKSLE 540 TEFLDGCSGT AYQEMQCSET LYRFEFIMQS SPKVWVVFLD TSTMELSCSC KKFEMMGILC 600 SHALNALGLK NLDKIPESYV LKRWTKYVRK GTYVFPSDQS PEQDCTEAVL AYRNRAMWFV 660 YDLLMKSKGH QDTRKLILDV LENGEKSLES VCELKRMHIH PSGKDKDASK AEKRKKKLKK 720 QDKNSRNVKQ VVLPPPAESV FVDQPNQNQY FATEDIATNS SIGRPFFYQE YPATGVSASQ 780 IEGHANIHSV PQCAPAPQEF PAYDAVHPPS TFGGESNF

Sequence ? help Back to Top

Protein Sequence Length: 818 aa Download sequence

EMEGTSVPIE IDGDAICLEN VGDDEHEAQE SEQVQIIYAT ENGAQVAFDS QEQGTEEHSV  60
RSEEEQENNS VIPSREEFTE ELRTKVAYSE EQAYRLYCEY GHRMGFSVRK GKQYYFTGTK  120
VIRTKDYYCS KEGLKDDEQL TEANFNKPET RTNCKAMVRF RVDSEGQWRV IQIIPEHNHE  180
LVPPEEIHLL RSVRILSIPK PGTLNAMVNA EIQSMHDSLH VHDDGAECHS QVSIQSYALL  240
EPEDAEALVG YLKRRTIEQG MFYWDVQVDQ EGQMTNFFWR DGRSRVDYDC FGDVVVFDTS  300
YRTNKYNMIC APFVGINHHM QNVMFGCAFM LDESLTSYEW LLKSFLESMG GCPPKTIFTD  360
QNDTISKAIE VILPETCHCL CQWHIEKNLQ AHLDTPNASG TFHSMFMKCM KDCESETEFE  420
ETWAMMLQEH NLQDDQWLTD LFEQRHKWCT ALHKVAFDCG IRSLDRNFSS DNVLGSIADE  480
STSPTNFALE FDKLVGSWRT NESVDDIQCK QISPECSVKQ NSILQHAAEV YTHKVYKSLE  540
TEFLDGCSGT AYQEMQCSET LYRFEFIMQS SPKVWVVFLD TSTMELSCSC KKFEMMGILC  600
SHALNALGLK NLDKIPESYV LKRWTKYVRK GTYVFPSDQS PEQDCTEAVL AYRNRAMWFV  660
YDLLMKSKGH QDTRKLILDV LENGEKSLES VCELKRMHIH PSGKDKDASK AEKRKKKLKK  720
QDKNSRNVKQ VVLPPPAESV FVDQPNQNQY FATEDIATNS SIGRPFFYQE YPATGVSASQ  780
IEGHANIHSV PQCAPAPQEF PAYDAVHPPS TFGGESNF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	9e-81	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG006720.3