PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG007720.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 262aa MW: 28700.1 Da PI: 7.5361

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG007720.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.8	4.1e-13	123	201	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC.............................TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkas..........................kapskKlsKaeiLekAveYIksLq 55 + hn ErrRRdriN+++ L+el+P++ + +Ka++L +A+eY+ksLq TRIDC5AG007720.2 123 QVHNLSERRRRDRINEKMRALQELVPHCNkvctasntilniilsncdrsdhlvlgIEFFHQTDKASMLDEAIEYLKSLQ 201 56***********************888********************966667789*************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 262 aa Download sequence
LHGDGPRDSP ASEAGESSVV TMGSRRVCGG SNQAQTPHVS DTADDDSVLL PRSGREARDA 60 RSYHSASATL TTSSTWSRPS GASKRKQSEG PSEAMQDVES DSADVTCETA QKPTTAKRRR 120 AAQVHNLSER RRRDRINEKM RALQELVPHC NKVCTASNTI LNIILSNCDR SDHLVLGIEF 180 FHQTDKASML DEAIEYLKSL QLQLQVMWAM GGRMTLAPAP VMFPAGAHQY MQRMAAISSR 240 MPPFTTCVYS SNDPEMTQTL SS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	117	133	KRRRAAQVHNLSERRRR
2	118	134	KRRRAAQVHNLSERRRR
3	129	134	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09530.2	6e-31	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG007720.2