PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG007720.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 231aa MW: 25244.2 Da PI: 8.3397

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG007720.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	52.9	6.8e-17	123	170	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + hn ErrRRdriN+++ L+el+P++ K +Ka++L +A+eY+ksLq TRIDC5AG007720.3 123 QVHNLSERRRRDRINEKMRALQELVPHC-----NKTDKASMLDEAIEYLKSLQ 170 56***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 231 aa Download sequence
LHGDGPRDSP ASEAGESSVV TMGSRRVCGG SNQAQTPHVS DTADDDSVLL PRSGREARDA 60 RSYHSASATL TTSSTWSRPS GASKRKQSEG PSEAMQDVES DSADVTCETA QKPTTAKRRR 120 AAQVHNLSER RRRDRINEKM RALQELVPHC NKTDKASMLD EAIEYLKSLQ LQLQVMWAMG 180 GRMTLAPAPV MFPAGAHQYM QRMAAISSRM PPFTTCVYSS NDPEMTQTLS S

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	117	133	KRRRAAQVHNLSERRRR
2	118	134	KRRRAAQVHNLSERRRR
3	129	134	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09530.2	9e-37	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG007720.3