PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG008190.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CPP

Protein Properties

Length: 603aa MW: 65584.2 Da PI: 6.9183

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG008190.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	49.8	7e-16	483	522	2	41
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 ++k+C+CkkskClk+YCeCf+ag++Cse C+C++C Nk + TRIDC5AG008190.5 483 SCKRCSCKKSKCLKLYCECFHAGVFCSEPCSCQGCLNKPS 522 689**********************************976 PP
2	TCR	33	1.2e-10	568	590	1	23
TCR 1 kekkgCnCkkskClkkYCeCfaa 23 ++k+gCnCkks+ClkkYCeC++ TRIDC5AG008190.5 568 RHKRGCNCKKSSCLKKYCECYQV 590 589******************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 603 aa Download sequence
MDTPDRPRAG AAAGFEDSPV FNFINNLSPI PPPKPQDTSH NVHLFKSSDL APVSSIFASP 60 HVNPPKESKL LIRDDSVQLS QDSNSPNSVR TRLGSAIRLI KCKNIVSENC SFTCHLNQGP 120 IDSSANRSNS TSKLPQTIQF VGDSSECGKN QNADGKKDLA RDQESIELEG ALLDHTGPDK 180 IDSSQPGRIV HENQQCEQQK DGFTAYDGDY LITHESSMDM LRLAPPCETD TQLVNETLNA 240 DNVFSGNSLL TDGPSGSYIS NAAHDPNLYW DGTVEGPTTD YTPQLLPGAC QSQSVSNDQI 300 CNAVEEPSDH IPIDQSALSQ NMRGMRRRCL FNEKAGAVNK AAKKTSDRHS ANTTTPRCKT 360 NSGDKPVRTP PCALPGIGLH LNALAPISTD KIVPQAAQSS INQASNFPCA VSSSTSEPNI 420 VNEDSSQAIV VANADESGQG SPKKKRYNVY ACHFMSPAPF YWTNHGNAIL PCRHKFDDGD 480 GTSCKRCSCK KSKCLKLYCE CFHAGVFCSE PCSCQGCLNK PSNMEIVLST REQIESRNPL 540 AFAPKVIRTS EPGQESGEYS NKTPASARHK RGCNCKKSSC LKKYCECYQV HTLIWFNILY 600 LAG

Sequence ? help Back to Top

Protein Sequence Length: 603 aa Download sequence

MDTPDRPRAG AAAGFEDSPV FNFINNLSPI PPPKPQDTSH NVHLFKSSDL APVSSIFASP  60
HVNPPKESKL LIRDDSVQLS QDSNSPNSVR TRLGSAIRLI KCKNIVSENC SFTCHLNQGP  120
IDSSANRSNS TSKLPQTIQF VGDSSECGKN QNADGKKDLA RDQESIELEG ALLDHTGPDK  180
IDSSQPGRIV HENQQCEQQK DGFTAYDGDY LITHESSMDM LRLAPPCETD TQLVNETLNA  240
DNVFSGNSLL TDGPSGSYIS NAAHDPNLYW DGTVEGPTTD YTPQLLPGAC QSQSVSNDQI  300
CNAVEEPSDH IPIDQSALSQ NMRGMRRRCL FNEKAGAVNK AAKKTSDRHS ANTTTPRCKT  360
NSGDKPVRTP PCALPGIGLH LNALAPISTD KIVPQAAQSS INQASNFPCA VSSSTSEPNI  420
VNEDSSQAIV VANADESGQG SPKKKRYNVY ACHFMSPAPF YWTNHGNAIL PCRHKFDDGD  480
GTSCKRCSCK KSKCLKLYCE CFHAGVFCSE PCSCQGCLNK PSNMEIVLST REQIESRNPL  540
AFAPKVIRTS EPGQESGEYS NKTPASARHK RGCNCKKSSC LKKYCECYQV HTLIWFNILY  600
LAG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	8e-48	CPP family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG008190.5