PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG008190.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CPP

Protein Properties

Length: 763aa MW: 81966.8 Da PI: 7.6118

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG008190.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	49.4	9.4e-16	454	493	2	41
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 ++k+C+CkkskClk+YCeCf+ag++Cse C+C++C Nk + TRIDC5AG008190.7 454 SCKRCSCKKSKCLKLYCECFHAGVFCSEPCSCQGCLNKPS 493 689**********************************976 PP
2	TCR	50.6	3.9e-16	539	577	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkks+ClkkYCeC++ g+ Cs +C+Ce+CkN TRIDC5AG008190.7 539 RHKRGCNCKKSSCLKKYCECYQGGVGCSISCRCEGCKNA 577 589***********************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 763 aa Download sequence
GTFRIHPPSA FVDFDSPVFN FINNLSPIPP PKPQDTSHNV HLFKSSDLAP VSSIFASPHV 60 NPPKESKLLI RDDSVQLSQD SNSPNSVRTR LGSAIRLIKC KNIVSENCSF TCHLNQGPID 120 SSANRSNSTS KLPQTIQFVG DSSECGKNQN ADGKKDLARD QESIELEGAL LDHTGPDKID 180 SSQPGRIVHE NQQCEQQKDG FTAYDGDYLI THESSMDMLR LAPPCETDTQ LVNETLNADN 240 VFSGNSLLTD GPSGSYISNA AHDPNLYWDG TVEGPTTDYT PQLLPGACQS QSVSNDQICN 300 AVEEPSDHIP IDQSALSQNM RGMRRRCLFN EKAGAVNKAA KKTSDRHSAN TTTPRCKTNS 360 GDKPVRTPPC ALPGIGLHLN ALAPISTDKI VPQAAQSSIN QASNFPCAVS SSTSEPNIVN 420 EDSSQAIVVA NADESGQGSP KKKRHKFDDG DGTSCKRCSC KKSKCLKLYC ECFHAGVFCS 480 EPCSCQGCLN KPSNMEIVLS TREQIESRNP LAFAPKVIRT SEPGQESGEY SNKTPASARH 540 KRGCNCKKSS CLKKYCECYQ GGVGCSISCR CEGCKNAFGR REGLGPLSIE EAKQGNEENS 600 ACVKEEKKED DNNQLVICPA ANPAPAENVL TTPSAMDIRP LASLPPSSSK RPRSTTKVLG 660 HPSRLCNSQA PLKTDTVLSP FENYAEIMFG VGTSDSLKGG LSPQTSVKVV SPNKKRVSPP 720 RIGTGLSPIC KSGRKLILKS IPSFPSLGGD VNNADTKTTL PAP

Sequence ? help Back to Top

Protein Sequence Length: 763 aa Download sequence

GTFRIHPPSA FVDFDSPVFN FINNLSPIPP PKPQDTSHNV HLFKSSDLAP VSSIFASPHV  60
NPPKESKLLI RDDSVQLSQD SNSPNSVRTR LGSAIRLIKC KNIVSENCSF TCHLNQGPID  120
SSANRSNSTS KLPQTIQFVG DSSECGKNQN ADGKKDLARD QESIELEGAL LDHTGPDKID  180
SSQPGRIVHE NQQCEQQKDG FTAYDGDYLI THESSMDMLR LAPPCETDTQ LVNETLNADN  240
VFSGNSLLTD GPSGSYISNA AHDPNLYWDG TVEGPTTDYT PQLLPGACQS QSVSNDQICN  300
AVEEPSDHIP IDQSALSQNM RGMRRRCLFN EKAGAVNKAA KKTSDRHSAN TTTPRCKTNS  360
GDKPVRTPPC ALPGIGLHLN ALAPISTDKI VPQAAQSSIN QASNFPCAVS SSTSEPNIVN  420
EDSSQAIVVA NADESGQGSP KKKRHKFDDG DGTSCKRCSC KKSKCLKLYC ECFHAGVFCS  480
EPCSCQGCLN KPSNMEIVLS TREQIESRNP LAFAPKVIRT SEPGQESGEY SNKTPASARH  540
KRGCNCKKSS CLKKYCECYQ GGVGCSISCR CEGCKNAFGR REGLGPLSIE EAKQGNEENS  600
ACVKEEKKED DNNQLVICPA ANPAPAENVL TTPSAMDIRP LASLPPSSSK RPRSTTKVLG  660
HPSRLCNSQA PLKTDTVLSP FENYAEIMFG VGTSDSLKGG LSPQTSVKVV SPNKKRVSPP  720
RIGTGLSPIC KSGRKLILKS IPSFPSLGGD VNNADTKTTL PAP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	1e-75	CPP family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG008190.7