PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG008190.8

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CPP

Protein Properties

Length: 363aa MW: 39438.3 Da PI: 7.9454

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG008190.8	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	50.7	3.6e-16	238	277	2	41
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 ++k+C+CkkskClk+YCeCf+ag++Cse C+C++C Nk + TRIDC5AG008190.8 238 SCKRCSCKKSKCLKLYCECFHAGVFCSEPCSCQGCLNKPS 277 689**********************************976 PP
2	TCR	34.5	4.2e-11	323	344	1	22
TCR 1 kekkgCnCkkskClkkYCeCfa 22 ++k+gCnCkks+ClkkYCeC++ TRIDC5AG008190.8 323 RHKRGCNCKKSSCLKKYCECYQ 344 589******************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
DMLRLAPPCE TDTQLVNETL NADNVFSGNS LLTDGPSGSY ISNAAHDPNL YWDGTVEGPT 60 TDYTPQLLPG ACQSQSVSND QICNAVEEPS DHIPIDQSAL SQNMRGMRRR CLFNEKAGAV 120 NKAAKKTSDR HSANTTTPRC KTNSGDKPVR TPPCALPGIG LHLNALAPIS TDKIVPQAAQ 180 SSINQASNFP CAVSSSTSEP NIVNEDSSQA IVVANADESG QGSPKKKRHK FDDGDGTSCK 240 RCSCKKSKCL KLYCECFHAG VFCSEPCSCQ GCLNKPSNME IVLSTREQIE SRNPLAFAPK 300 VIRTSEPGQE SGEYSNKTPA SARHKRGCNC KKSSCLKKYC ECYQGWRGML HKLQMRGMQE 360 CFW

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

DMLRLAPPCE TDTQLVNETL NADNVFSGNS LLTDGPSGSY ISNAAHDPNL YWDGTVEGPT  60
TDYTPQLLPG ACQSQSVSND QICNAVEEPS DHIPIDQSAL SQNMRGMRRR CLFNEKAGAV  120
NKAAKKTSDR HSANTTTPRC KTNSGDKPVR TPPCALPGIG LHLNALAPIS TDKIVPQAAQ  180
SSINQASNFP CAVSSSTSEP NIVNEDSSQA IVVANADESG QGSPKKKRHK FDDGDGTSCK  240
RCSCKKSKCL KLYCECFHAG VFCSEPCSCQ GCLNKPSNME IVLSTREQIE SRNPLAFAPK  300
VIRTSEPGQE SGEYSNKTPA SARHKRGCNC KKSSCLKKYC ECYQGWRGML HKLQMRGMQE  360
CFW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	5e-56	CPP family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG008190.8