PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG008190.9

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CPP

Protein Properties

Length: 384aa MW: 40957.5 Da PI: 8.6785

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG008190.9	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	50.6	3.9e-16	75	114	2	41
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 ++k+C+CkkskClk+YCeCf+ag++Cse C+C++C Nk + TRIDC5AG008190.9 75 SCKRCSCKKSKCLKLYCECFHAGVFCSEPCSCQGCLNKPS 114 689**********************************976 PP
2	TCR	51.8	1.6e-16	160	198	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkks+ClkkYCeC++ g+ Cs +C+Ce+CkN TRIDC5AG008190.9 160 RHKRGCNCKKSSCLKKYCECYQGGVGCSISCRCEGCKNA 198 589***********************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 384 aa Download sequence
TPRCKTNSDK IVPQAAQSSI NQASNFPCAV SSSTSEPNIV NEDSSQAIVV ANADESGQGS 60 PKKKRHKFDD GDGTSCKRCS CKKSKCLKLY CECFHAGVFC SEPCSCQGCL NKPSNMEIVL 120 STREQIESRN PLAFAPKVIR TSEPGQESGE YSNKTPASAR HKRGCNCKKS SCLKKYCECY 180 QGGVGCSISC RCEGCKNAFG RREGLGPLSI EEAKQGNEEN SACVKEEKKE DDNNQLVICP 240 AANPAPAENV LTTPSAMDIR PLASLPPSSS KRPRSTTKVL GHPSRLCNSQ APLKTDTVLS 300 PFENYAEIMF GVGTSDSLKG GLSPQTSVKV VSPNKKRVSP PRIGTGLSPI CKSGRKLILK 360 SIPSFPSLGG DVNNADTKTT LPAP

Sequence ? help Back to Top

Protein Sequence Length: 384 aa Download sequence

TPRCKTNSDK IVPQAAQSSI NQASNFPCAV SSSTSEPNIV NEDSSQAIVV ANADESGQGS  60
PKKKRHKFDD GDGTSCKRCS CKKSKCLKLY CECFHAGVFC SEPCSCQGCL NKPSNMEIVL  120
STREQIESRN PLAFAPKVIR TSEPGQESGE YSNKTPASAR HKRGCNCKKS SCLKKYCECY  180
QGGVGCSISC RCEGCKNAFG RREGLGPLSI EEAKQGNEEN SACVKEEKKE DDNNQLVICP  240
AANPAPAENV LTTPSAMDIR PLASLPPSSS KRPRSTTKVL GHPSRLCNSQ APLKTDTVLS  300
PFENYAEIMF GVGTSDSLKG GLSPQTSVKV VSPNKKRVSP PRIGTGLSPI CKSGRKLILK  360
SIPSFPSLGG DVNNADTKTT LPAP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	2e-70	CPP family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG008190.9