PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG010040.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 379aa    MW: 43998.9 Da    PI: 8.0697
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG010040.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B345.71.1e-14621451199
                       HHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3  11 lksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                         ++r+++p k a+++ g++++++   tl+ +sg++W+v +  +k  ++ ++  GW eF++a++L+e+D + Fk +g+ +f   v +f++
  TRIDC5AG010040.1  62 DFQQRISIPEKIANNFiGKITNGG--FTLKAPSGEEWRVGV--EKIADELFFMPGWVEFARAHELQENDLLFFKCSGNGSF--DVLIFDA 145
                       445689*******77787777776..8999***********..******99999********************9888777..8888875 PP
2B349.76.8e-162833701199
                       HHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE-S CS
                B3  11 lksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfrk 99 
                        +++ l++p kfa++h +g   ++ +l l+  + ++W +k+ y ++  r +  + W++Fv++n+L+eg ++vF+l++  ++++++v+v+rk
  TRIDC5AG010040.1 283 RTNNFLIVPSKFAADHlEGR--SHEMLLLRPNRKEKWYLKY-YHGSVTRGFNCRRWSKFVRDNRLREGYVCVFELMKGaRKATMTVHVLRK 370
                       456789**********7555..444788888999*******.6666666556679*******************99877*********997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 379 aa     Download sequence    
EKPRTHLLLS SFLRSGSAAF RCELMVDGKG RCGRCREWQE HYYWEHMEDV SKISFFKFMT  60
GDFQQRISIP EKIANNFIGK ITNGGFTLKA PSGEEWRVGV EKIADELFFM PGWVEFARAH  120
ELQENDLLFF KCSGNGSFDV LIFDAGGCEK VSCFFASKKG TNMRKQFDNI VCQHGEEHCI  180
LSDSNDTSMP LSQLVRSTHK ASTSKKPRKE TESPKNNNYF LKNEAVEEEE ESDDHHTESD  240
YYYYSRFANC LSEDDREEIF GLASIQLGNP VYVAVLQKTH VRRTNNFLIV PSKFAADHLE  300
GRSHEMLLLR PNRKEKWYLK YYHGSVTRGF NCRRWSKFVR DNRLREGYVC VFELMKGARK  360
ATMTVHVLRK VDDKFVLLG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.19e-30B3 family protein