PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG010040.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Protein Properties

Length: 254aa MW: 28576.5 Da PI: 6.9761

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG010040.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	46.8	5.3e-15	105	188	11	99
HHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 11 lksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 ++r+++p k a+++ g++++++ tl+ +sg++W+v + +k ++ ++ GW eF++a++L+e+D + Fk +g+ +f v +f++ TRIDC5AG010040.3 105 DFQQRISIPEKIANNFiGKITNGG--FTLKAPSGEEWRVGV--EKIADELFFMPGWVEFARAHELQENDLLFFKCSGNGSF--DVLIFDA 188 445689*****77787777776..8999*******..**99999******************9888777..8888875 PP

Sequence ? help Back to Top
Protein Sequence Length: 254 aa Download sequence
NIKEKSYNSL VGEAKNSSPP LLLPQVRVSC IQMYAHTLLS LHRIHGFGAL ATDEASCTSA 60 MVVAGELMVD GKGRCGRCRE WQEHYYWEHM EDVSKISFFK FMTGDFQQRI SIPEKIANNF 120 IGKITNGGFT LKAPSGEEWR VGVEKIADEL FFMPGWVEFA RAHELQENDL LFFKCSGNGS 180 FDVLIFDAGG CEKVSCFFAS KKGTNMRKQF DNIVCQHGEE HCILSDSNDT SMPLSQLVRS 240 THKASTSKKP RERD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G33280.1	3e-21	B3 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG010040.3