PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG010130.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 316aa    MW: 36455.5 Da    PI: 8.5463
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG010130.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B357.52.5e-18696198
                      EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
                B3  1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95
                      ff v++  +++k+  l++pk+f ++  gk   s +++le ++ + ++v++  +k ++++vl++GW  Fv+a +LkegD+++F ++g+s    +v+
  TRIDC5AG010130.1  6 FFMVMMGVSASKNE-LTIPKEFSNNVRGK--ISDEIKLEVPDVQAYRVQV--DKEPNEVVLRSGWDAFVSAYELKEGDTLLFAYTGNSHL--KVQ 93
                      56666666667766.*******9777777..6779***************..********************************997777..898 PP

                      EE- CS
                B3 96 vfr 98
                      +f+
  TRIDC5AG010130.1 94 IFN 96
                      886 PP
2B357.72.1e-18165254299
                       EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
                B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                       fkv    +++k   + +p kfa+++ g    s +++le ++g+ ++v++     + + vl++GW +F+ a +LkegD +vF+++g+s f  +v
  TRIDC5AG010130.1 165 FKVV-ILSNFKD-EMAIPPKFATNFRGR--ISDEVKLEVPDGKIYNVQV--AEEQHKLVLRSGWANFAGAYELKEGDLLVFTYSGDSHF--KV 249
                       5655.3444554.59*******888766..6779***************..999999****************************9999..99 PP

                       EEE-S CS
                B3  95 kvfrk 99 
                       k+f+ 
  TRIDC5AG010130.1 250 KIFKP 254
                       99975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MDKMRFFMVM MGVSASKNEL TIPKEFSNNV RGKISDEIKL EVPDVQAYRV QVDKEPNEVV  60
LRSGWDAFVS AYELKEGDTL LFAYTGNSHL KVQIFNLSGC DKLLSCVVKN NPMHSPRESA  120
YHDNPLQSPR ERTGPNDHRN KACTKCKECV GRHYWHMEDH NWSFFKVVIL SNFKDEMAIP  180
PKFATNFRGR ISDEVKLEVP DGKIYNVQVA EEQHKLVLRS GWANFAGAYE LKEGDLLVFT  240
YSGDSHFKVK IFKPSGCENE FSCVTMSCGP NVQERDICHD QSLPTKKRCR NDGLTDSWKL  300
RRRLQRTHLR RNQVQN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18960.16e-16B3 family protein