PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG010140.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 671aa MW: 78022.9 Da PI: 6.1335

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG010140.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	63.2	7.3e-20	137	219	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fYn+YA +GF+ ++ +++ + +k ++ C+++gk++ + + +++r++++ ++t+C+ak+ vk+ +g+we t++++eHnH+l+p TRIDC5AG010140.3 137 RFYNTYALLTGFEAKRGTNYMR------KKFHLICNRSGKSRATPDL-QRKRKRKSIEKTNCQAKVIVKLA-KGQWEFTTVRNEHNHPLCP 219 5***************9998......4678******99988.99999**************.9**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 671 aa Download sequence
MTEGRLQPAG DNYQEPVGKQ SMTEGTLQPA GDNDQDPSSD SIEKNTEGLL ADGQDQQTNS 60 VYHPLQQAEE ENQLHDIVES NEMLRNNSSS ETDSDSSSGS DSDSEVGKYF YPQIEQLEMA 120 KQPEPGMKFQ TLEDAHRFYN TYALLTGFEA KRGTNYMRKK FHLICNRSGK SRATPDLQRK 180 RKRKSIEKTN CQAKVIVKLA KGQWEFTTVR NEHNHPLCPS ASLTKFYLSH KHISTEERSF 240 LKVLQRTRIP PNKVMKIFRR MRGSFGSIPF KKKDGTNLLC IEQHRKENSD VGRMLMYFKE 300 KELQDPSFQC MKQTDEDNIV RSVFWTDARS RMDYEIFGDF LLFDTTYTTD RHNMLFAPII 360 GINNHGRTLL LGCALLHDES AETYKWMFET LLHVMEDKMP VSIITNQDEA MAKAIGEVMP 420 QVRHRLCKWD VLEKAQQNIS AFIAESGNIK ADLNSLIDNS LTEKEFEEGW DALIERYGAS 480 ENEYLQLLWQ RRKNWVPVYF REDFYPFVQS HGCDEGMNLL FNDYVLSIDR IEKFIERYEE 540 IHKNITKTDE EDRLQTGTVP SCFSLQPIEK HAADIYTRQI FLKVQRELLH STAFNVQEVQ 600 RGAVYRLNKV FNYENPEFDR NNFEVQVESG TNAFKCQCAK FTRDGILCCH IFRLFTQFGI 660 NQIPEQYIVP R

Sequence ? help Back to Top

Protein Sequence Length: 671 aa Download sequence

MTEGRLQPAG DNYQEPVGKQ SMTEGTLQPA GDNDQDPSSD SIEKNTEGLL ADGQDQQTNS  60
VYHPLQQAEE ENQLHDIVES NEMLRNNSSS ETDSDSSSGS DSDSEVGKYF YPQIEQLEMA  120
KQPEPGMKFQ TLEDAHRFYN TYALLTGFEA KRGTNYMRKK FHLICNRSGK SRATPDLQRK  180
RKRKSIEKTN CQAKVIVKLA KGQWEFTTVR NEHNHPLCPS ASLTKFYLSH KHISTEERSF  240
LKVLQRTRIP PNKVMKIFRR MRGSFGSIPF KKKDGTNLLC IEQHRKENSD VGRMLMYFKE  300
KELQDPSFQC MKQTDEDNIV RSVFWTDARS RMDYEIFGDF LLFDTTYTTD RHNMLFAPII  360
GINNHGRTLL LGCALLHDES AETYKWMFET LLHVMEDKMP VSIITNQDEA MAKAIGEVMP  420
QVRHRLCKWD VLEKAQQNIS AFIAESGNIK ADLNSLIDNS LTEKEFEEGW DALIERYGAS  480
ENEYLQLLWQ RRKNWVPVYF REDFYPFVQS HGCDEGMNLL FNDYVLSIDR IEKFIERYEE  540
IHKNITKTDE EDRLQTGTVP SCFSLQPIEK HAADIYTRQI FLKVQRELLH STAFNVQEVQ  600
RGAVYRLNKV FNYENPEFDR NNFEVQVESG TNAFKCQCAK FTRDGILCCH IFRLFTQFGI  660
NQIPEQYIVP R

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	179	184	RKRKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-80	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG010140.3