PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG010140.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 589aa    MW: 69041.5 Da    PI: 7.7036
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG010140.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR163.56.1e-2055137191
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                       +fYn+YA  +GF+ ++ +++ +      +k ++ C+++gk++ + +  +++r++++ ++t+C+ak+ vk+  +g+we t++++eHnH+l+p
  TRIDC5AG010140.4  55 RFYNTYALLTGFEAKRGTNYMR------KKFHLICNRSGKSRATPDL-QRKRKRKSIEKTNCQAKVIVKLA-KGQWEFTTVRNEHNHPLCP 137
                       5*****************9998......4678**********99988.99999******************.9****************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 589 aa     Download sequence    
MLRNNSSSET DSDSSSGSDS DSEVGKYFYP QIEQLEMAKQ PEPGMKFQTL EDAHRFYNTY  60
ALLTGFEAKR GTNYMRKKFH LICNRSGKSR ATPDLQRKRK RKSIEKTNCQ AKVIVKLAKG  120
QWEFTTVRNE HNHPLCPSAS LTKFYLSHKH ISTEERSFLK VLQRTRIPPN KVMKIFRRMR  180
GSFGSIPFKK KDGTNLLCIE QHRKENSDVG RMLMYFKEKE LQDPSFQCMK QTDEDNIVRS  240
VFWTDARSRM DYEIFGDFLL FDTTYTTDRH NMLFAPIIGI NNHGRTLLLG CALLHDESAE  300
TYKWMFETLL HVMEDKMPVS IITNQDEAMA KAIGEVMPQV RHRLCKWDVL EKAQQNISAF  360
IAESGNIKAD LNSLIDNSLT EKEFEEGWDA LIERYGASEN EYLQLLWQRR KNWVPVYFRE  420
DFYPFVQSHG CDEGMNLLFN DYVLSIDRIE KFIERYEEIH KNITKTDEED RLQTGTVPSC  480
FSLQPIEKHA ADIYTRQIFL KVQRELLHST AFNVQEVQRG AVYRLNKVFN YENPEFDRNN  540
FEVQVESGTN AFKCQCAKFT RDGILCCHIF RLFTQFGINQ IPEQYIVPR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
197102RKRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-80FAR1 family protein