PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG010140.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 660aa MW: 76790.7 Da PI: 6.2204

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG010140.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	63.3	7.1e-20	126	208	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fYn+YA +GF+ ++ +++ + +k ++ C+++gk++ + + +++r++++ ++t+C+ak+ vk+ +g+we t++++eHnH+l+p TRIDC5AG010140.6 126 RFYNTYALLTGFEAKRGTNYMR------KKFHLICNRSGKSRATPDL-QRKRKRKSIEKTNCQAKVIVKLA-KGQWEFTTVRNEHNHPLCP 208 5***************9998......4678******99988.99999**************.9**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 660 aa Download sequence
LCIEPVGKQS MTEGTLQPAG DNDQDPSSDS IEKNTEGLLA DGQDQQTNSV YHPLQQAEEE 60 NQLHDIVESN EMLRNNSSSE TDSDSSSGSD SDSEVGKYFY PQIEQLEMAK QPEPGMKFQT 120 LEDAHRFYNT YALLTGFEAK RGTNYMRKKF HLICNRSGKS RATPDLQRKR KRKSIEKTNC 180 QAKVIVKLAK GQWEFTTVRN EHNHPLCPSA SLTKFYLSHK HISTEERSFL KVLQRTRIPP 240 NKVMKIFRRM RGSFGSIPFK KKDGTNLLCI EQHRKENSDV GRMLMYFKEK ELQDPSFQCM 300 KQTDEDNIVR SVFWTDARSR MDYEIFGDFL LFDTTYTTDR HNMLFAPIIG INNHGRTLLL 360 GCALLHDESA ETYKWMFETL LHVMEDKMPV SIITNQDEAM AKAIGEVMPQ VRHRLCKWDV 420 LEKAQQNISA FIAESGNIKA DLNSLIDNSL TEKEFEEGWD ALIERYGASE NEYLQLLWQR 480 RKNWVPVYFR EDFYPFVQSH GCDEGMNLLF NDYVLSIDRI EKFIERYEEI HKNITKTDEE 540 DRLQTGTVPS CFSLQPIEKH AADIYTRQIF LKVQRELLHS TAFNVQEVQR GAVYRLNKVF 600 NYENPEFDRN NFEVQVESGT NAFKCQCAKF TRDGILCCHI FRLFTQFGIN QIPEQYIVPR

Sequence ? help Back to Top

Protein Sequence Length: 660 aa Download sequence

LCIEPVGKQS MTEGTLQPAG DNDQDPSSDS IEKNTEGLLA DGQDQQTNSV YHPLQQAEEE  60
NQLHDIVESN EMLRNNSSSE TDSDSSSGSD SDSEVGKYFY PQIEQLEMAK QPEPGMKFQT  120
LEDAHRFYNT YALLTGFEAK RGTNYMRKKF HLICNRSGKS RATPDLQRKR KRKSIEKTNC  180
QAKVIVKLAK GQWEFTTVRN EHNHPLCPSA SLTKFYLSHK HISTEERSFL KVLQRTRIPP  240
NKVMKIFRRM RGSFGSIPFK KKDGTNLLCI EQHRKENSDV GRMLMYFKEK ELQDPSFQCM  300
KQTDEDNIVR SVFWTDARSR MDYEIFGDFL LFDTTYTTDR HNMLFAPIIG INNHGRTLLL  360
GCALLHDESA ETYKWMFETL LHVMEDKMPV SIITNQDEAM AKAIGEVMPQ VRHRLCKWDV  420
LEKAQQNISA FIAESGNIKA DLNSLIDNSL TEKEFEEGWD ALIERYGASE NEYLQLLWQR  480
RKNWVPVYFR EDFYPFVQSH GCDEGMNLLF NDYVLSIDRI EKFIERYEEI HKNITKTDEE  540
DRLQTGTVPS CFSLQPIEKH AADIYTRQIF LKVQRELLHS TAFNVQEVQR GAVYRLNKVF  600
NYENPEFDRN NFEVQVESGT NAFKCQCAKF TRDGILCCHI FRLFTQFGIN QIPEQYIVPR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	168	173	RKRKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-80	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG010140.6