PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG010140.7
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 658aa    MW: 76608.4 Da    PI: 6.2207
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG010140.7genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR163.37.1e-20124206191
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                       +fYn+YA  +GF+ ++ +++ +      +k ++ C+++gk++ + +  +++r++++ ++t+C+ak+ vk+  +g+we t++++eHnH+l+p
  TRIDC5AG010140.7 124 RFYNTYALLTGFEAKRGTNYMR------KKFHLICNRSGKSRATPDL-QRKRKRKSIEKTNCQAKVIVKLA-KGQWEFTTVRNEHNHPLCP 206
                       5*****************9998......4678**********99988.99999******************.9****************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 658 aa     Download sequence    
FEPVGKQSMT EGTLQPAGDN DQDPSSDSIE KNTEGLLADG QDQQTNSVYH PLQQAEEENQ  60
LHDIVESNEM LRNNSSSETD SDSSSGSDSD SEVGKYFYPQ IEQLEMAKQP EPGMKFQTLE  120
DAHRFYNTYA LLTGFEAKRG TNYMRKKFHL ICNRSGKSRA TPDLQRKRKR KSIEKTNCQA  180
KVIVKLAKGQ WEFTTVRNEH NHPLCPSASL TKFYLSHKHI STEERSFLKV LQRTRIPPNK  240
VMKIFRRMRG SFGSIPFKKK DGTNLLCIEQ HRKENSDVGR MLMYFKEKEL QDPSFQCMKQ  300
TDEDNIVRSV FWTDARSRMD YEIFGDFLLF DTTYTTDRHN MLFAPIIGIN NHGRTLLLGC  360
ALLHDESAET YKWMFETLLH VMEDKMPVSI ITNQDEAMAK AIGEVMPQVR HRLCKWDVLE  420
KAQQNISAFI AESGNIKADL NSLIDNSLTE KEFEEGWDAL IERYGASENE YLQLLWQRRK  480
NWVPVYFRED FYPFVQSHGC DEGMNLLFND YVLSIDRIEK FIERYEEIHK NITKTDEEDR  540
LQTGTVPSCF SLQPIEKHAA DIYTRQIFLK VQRELLHSTA FNVQEVQRGA VYRLNKVFNY  600
ENPEFDRNNF EVQVESGTNA FKCQCAKFTR DGILCCHIFR LFTQFGINQI PEQYIVPR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1166171RKRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.13e-80FAR1 family protein