PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG010160.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 398aa    MW: 45241.3 Da    PI: 6.5741
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG010160.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B337.73.7e-121593799
                      EEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3 37 tledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                      +le ++g++ +v++  +k  ++ v+++GW  Fv+  +L++gD+++F+++g+s+f   v++f++
  TRIDC5AG010160.1  1 MLEVPNGEKHSVQV--SKEENGLVFQSGWAAFVSTYELEQGDSLLFEFSGSSCF--EVRIFNQ 59
                      578899********..**********************************9***..8888875 PP
2B354.52.2e-1782172198
                       EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                       ff v++  + +k+g l++pk fa+++ ++   s ++ le ++g+ + +++     + + vl++GW +F +a +L+egD+v+F ++g+s f  +
  TRIDC5AG010160.1  82 FFMVMMGVSDSKNG-LTIPKGFANNIRQQ--ISEKIELELPDGQNFGIQV--AEERHELVLRSGWDRFSSAYDLEEGDIVLFGYSGNSHF--K 167
                       66677777777777.********877655..7789***************..999999****************************9999..9 PP

                       EEEE- CS
                B3  94 vkvfr 98 
                       v++f+
  TRIDC5AG010160.1 168 VRIFD 172
                       99987 PP
3B358.31.4e-18240330199
                       EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                       ffkv+   +++k   + +p kfa+++ g    s +l+le ++g+ ++v++   + + + vl++GW +F++  +Lk +Df+vF+++g+s f  +
  TRIDC5AG010160.1 240 FFKVM-ILSNFKD-EMAIPPKFATNFRGH--ISDELKLEVPDGKIYNVQV--AREQHELVLGSGWANFARTYELKRNDFLVFTYSGDSHF--K 324
                       78888.3444544.59*******888666..6779***************..99999*****************************9999..9 PP

                       EEEE-S CS
                B3  94 vkvfrk 99 
                       vk+f+ 
  TRIDC5AG010160.1 325 VKIFKP 330
                       999975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 398 aa     Download sequence    
MLEVPNGEKH SVQVSKEENG LVFQSGWAAF VSTYELEQGD SLLFEFSGSS CFEVRIFNQT  60
GCEKELSCVA MNRTPCVHKM RFFMVMMGVS DSKNGLTIPK GFANNIRQQI SEKIELELPD  120
GQNFGIQVAE ERHELVLRSG WDRFSSAYDL EEGDIVLFGY SGNSHFKVRI FDISGCDKLL  180
SCVMKNFTTC AQQKSGCHDN PMQSPRERTG PNDRRNRACT ICIECVARHY WHMEDHTWSF  240
FKVMILSNFK DEMAIPPKFA TNFRGHISDE LKLEVPDGKI YNVQVAREQH ELVLGSGWAN  300
FARTYELKRN DFLVFTYSGD SHFKVKIFKP SGCENELSCV TMSCVLALVP TDIFQDQSLP  360
TKKEGRYDGT SDSWRTSKIN QADSSSQKSS SVLNRLKM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18960.11e-13B3 family protein