PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG010280.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Protein Properties

Length: 259aa MW: 30243.4 Da PI: 6.8673

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG010280.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	55.6	1e-17	160	250	10	99
HHHTT-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTE...EEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE CS B3 10 vlksgrlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgr...yvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvf 97 ++++++l++p++fa++h + +s ++ l + ++W v++ y +s + + + W +Fv +n+L eg ++vF+l+++ +++++v+vf TRIDC5AG010280.1 160 SSRNNLLTFPREFAAKHLAE--RSHDILLLRpNRREKWCVRYYY--HSMMriqGFSYSSWTKFVCDNRLHEGHVCVFELMKSaCKATMMVHVF 248 3455889********433..34455555527779**44..333323445668******************999******** PP -S CS B3 98 rk 99 rk TRIDC5AG010280.1 249 RK 250 96 PP

Sequence ? help Back to Top
Protein Sequence Length: 259 aa Download sequence
VICKDYAAKY LPHEDQFITL CHPHKSNIWV DNLKVITDGS CMLSVGWSCF VLHNELRESD 60 ICLFEVSKND GEVTMVVHSL EGGHHLQGKK PESQNKCSYP VKVEVTEEEE SDNELAESNY 120 YYSRYAYDLT GKEQEEIFRS ALIQQGNPVY VAVLQENHVS SRNNLLTFPR EFAAKHLAER 180 SHDILLLRPN RREKWCVRYY YHSMMRIQGF SYSSWTKFVC DNRLHEGHVC VFELMKSACK 240 ATMMVHVFRK FNGRFVLLD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G33280.1	9e-07	B3 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG010280.1