PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG010290.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 214aa    MW: 24980.2 Da    PI: 6.933
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG010290.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3482.3e-15531311397
                       TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
                B3  13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                       ++ +++p kf+e+++g+   s  ++le ++g+ ++v+   +k  +++vl++GW  F +  ++keg f+vF+++g s f  +v vf
  TRIDC5AG010290.1  53 QDKMTIPQKFVENFKGQ--ISEVIKLEAPDGNIFNVQA--TKDLNKIVLGSGWGVFISFYEVKEGYFLVFRYMGASHF--KVLVF 131
                       5679*******999888..7779***************..**********************************9999..77666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MAPDQYHEQG NRSGHNISSK SFQRCEGCDA HYYWCHMDDT QKYFSKCMVG NFQDKMTIPQ  60
KFVENFKGQI SEVIKLEAPD GNIFNVQATK DLNKIVLGSG WGVFISFYEV KEGYFLVFRY  120
MGASHFKVLV FDFASCCEKE VLHVLMNYGP NAQEKDIRLD QSPLSERRCQ NGGSSNGGSH  180
QRCEHCDVHF YWHHMDDRQK HFLRLMFGDF RQEI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.13e-17B3 family protein